Author Correction: Arkitekt: streaming analysis and real-time workflows for microscopy
Johannes Roos, Stéphane Bancelin, Tom Delaire, Alexander Wilhelmi, Florian Levet, Maren Engelhardt, Virgile Viasnoff, Rémi Galland, U. Valentin Nägerl, Jean-Baptiste Sibarita
Nat Methods. 2025-01-21
10.1038/s41592-025-02597-3

Arkitekt: streaming analysis and real-time workflows for microscopy
Johannes Roos, Stéphane Bancelin, Tom Delaire, Alexander Wilhelmi, Florian Levet, Maren Engelhardt, Virgile Viasnoff, Rémi Galland, U. Valentin Nägerl, Jean-Baptiste Sibarita
Nat Methods. 2024-09-18
10.1038/s41592-024-02404-5

Protocol for matching protein localization to synapse morphology in primary rat neurons by correlative super-resolution microscopy
Tiffany Cloâtre, Magali Mondin, Jean-Baptiste Sibarita, Florian Levet, Olivier Thoumine
STAR Protocols. 2024-09-01
10.1016/j.xpro.2024.103160

Non-canonical interplay between glutamatergic NMDA and dopamine receptors shapes synaptogenesis
Nathan Bénac, G. Ezequiel Saraceno, Corey Butler, Nahoko Kuga, Yuya Nishimura, Taiki Yokoi, Ping Su, Takuya Sasaki, Mar Petit-Pedrol, Rémi Galland, Vincent Studer, Fang Liu, Yuji Ikegaya, Jean-Baptiste Sibarita, Laurent Groc
Nat Commun. 2024-01-02
10.1038/s41467-023-44301-z

Nanoscale and functional heterogeneity of the hippocampal extracellular space
Diego Grassi, Agata Idziak, Antony Lee, Ivo Calaresu, Jean-Baptiste Sibarita, Laurent Cognet, U. Valentin Nägerl, Laurent Groc
Cell Reports. 2023-05-01
10.1016/j.celrep.2023.112478

Multi-synaptic boutons are a feature of CA1 hippocampal connections in the stratum oriens
Mark Rigby, Federico W. Grillo, Benjamin Compans, Guilherme Neves, Julia Gallinaro, Sophie Nashashibi, Sally Horton, Pedro M. Pereira Machado, Maria Alejandra Carbajal, Gema Vizcay-Barrena, Florian Levet, Jean-Baptiste Sibarita, Angus Kirkland, Roland A. Fleck, Claudia Clopath, Juan Burrone
Cell Reports. 2023-05-01
10.1016/j.celrep.2023.112397

PoCA: a software platform for point cloud data visualization and quantification
Florian Levet, Jean-Baptiste Sibarita
Nat Methods. 2023-03-03
10.1038/s41592-023-01811-4

A framework for evaluating the performance of SMLM cluster analysis algorithms
Daniel J. Nieves, Jeremy A. Pike, Florian Levet, David J. Williamson, Mohammed Baragilly, Sandra Oloketuyi, Ario de Marco, Juliette Griffié, Daniel Sage, Edward A. K. Cohen, Jean-Baptiste Sibarita, Mike Heilemann, Dylan M. Owen
Nat Methods. 2023-02-01
10.1038/s41592-022-01750-6

EndophilinA-dependent coupling between activity-induced calcium influx and synaptic autophagy is disrupted by a Parkinson-risk mutation
Adekunle T. Bademosi, Marianna Decet, Sabine Kuenen, Carles Calatayud, Jef Swerts, Sandra F. Gallego, Nils Schoovaerts, Spyridoula Karamanou, Nikolaos Louros, Ella Martin, Jean-Baptiste Sibarita, Katlijn Vints, Natalia V. Gounko, Frédéric A. Meunier, Anastassios Economou, Wim Versées, Frederic Rousseau, Joost Schymkowitz, Sandra-F. Soukup, Patrik Verstreken
Neuron. 2023-02-01
10.1016/j.neuron.2023.02.001

Fyn nanoclustering requires switching to an open conformation and is enhanced by FTLD-Tau biomolecular condensates
Ramón Martínez-Mármol, Christopher Small, Anmin Jiang, Tishila Palliyaguru, Tristan P. Wallis, Rachel S. Gormal, Jean-Baptiste Sibarita, Jürgen Götz, Frédéric A. Meunier
Mol Psychiatry. 2022-10-18
10.1038/s41380-022-01825-y

Single‐molecule imaging reveals Tau trapping at nanometer‐sized dynamic hot spots near the plasma membrane that persists after microtubule perturbation and cholesterol depletion
Pranesh Padmanabhan, Andrew Kneynsberg, Esteban Cruz, Rumelo Amor, Jean‐Baptiste Sibarita, Jürgen Götz
The EMBO Journal. 2022-08-25
10.15252/embj.2022111265

Author Correction: Nanoscale regulation of Ca2+ dependent phase transitions and real-time dynamics of SAP97/hDLG
Premchand Rajeev, Nivedita Singh, Adel Kechkar, Corey Butler, Narendrakumar Ramanan, Jean-Baptiste Sibarita, Mini Jose, Deepak Nair
Nat Commun. 2022-08-01
10.1038/s41467-022-32251-x

Nanoscale regulation of Ca2+ dependent phase transitions and real-time dynamics of SAP97/hDLG
Premchand Rajeev, Nivedita Singh, Adel Kechkar, Cory Butler, Narendrakumar Ramanan, Jean-Baptiste Sibarita, Mini Jose, Deepak Nair
Nat Commun. 2022-07-22
10.1038/s41467-022-31912-1

MID3A: Microscopy Image Denoising meets Differentiable Data Augmentation
Felix Fuentes-Hurtado, Tom Delaire, Florian Levet, Jean-Baptiste Sibarita, Virgile Viasnoff
2022 International Joint Conference on Neural Networks (IJCNN). 2022-07-18
10.1109/IJCNN55064.2022.9892954

Automated high-speed 3D imaging of organoid cultures with multi-scale phenotypic quantification
Anne Beghin, Gianluca Grenci, Geetika Sahni, Su Guo, Harini Rajendiran, Tom Delaire, Saburnisha Binte Mohamad Raffi, Damien Blanc, Richard de Mets, Hui Ting Ong, Xareni Galindo, Anais Monet, Vidhyalakshmi Acharya, Victor Racine, Florian Levet, Remi Galland, Jean-Baptiste Sibarita, Virgile Viasnoff
Nat Methods. 2022-06-13
10.1038/s41592-022-01508-0

Receptor tyrosine kinase MET ligand-interaction classified via machine learning from single-particle tracking data
Sebastian Malkusch, Johanna V. Rahm, Marina S. Dietz, Mike Heilemann, Jean-Baptiste Sibarita, Jörn Lötsch
MBoC. 2022-05-15
10.1091/mbc.e21-10-0496

Multi-Dimensional Spectral Single Molecule Localization Microscopy
Corey Butler, G Ezequiel Saraceno, Adel Kechkar, Nathan Bénac, Vincent Studer, Julien P. Dupuis, Laurent Groc, Rémi Galland, Jean-Baptiste Sibarita
Front. Bioinform.. 2022-03-04
10.3389/fbinf.2022.813494

Molecular motion and tridimensional nanoscale localization of kindlin control integrin activation in focal adhesions.
Thomas Orré, Adrien Joly, Zeynep Karatas, Birgit Kastberger, Clément Cabriel, Ralph T. Böttcher, Sandrine Lévêque-Fort, Jean-Baptiste Sibarita, Reinhard Fässler, Bernhard Wehrle-Haller, Olivier Rossier, Grégory Giannone
Nat Commun. 2021-05-25
10.1038/s41467-021-23372-w

NMDAR-dependent long-term depression is associated with increased short term plasticity through autophagy mediated loss of PSD-95
Benjamin Compans, Come Camus, Emmanouela Kallergi, Silvia Sposini, Magalie Martineau, Corey Butler, Adel Kechkar, Remco V. Klaassen, Natacha Retailleau, Terrence J. Sejnowski, August B. Smit, Jean-Baptiste Sibarita, Thomas M. Bartol, David Perrais, Vassiliki Nikoletopoulou, Daniel Choquet, Eric Hosy
Nat Commun. 2021-05-14
10.1038/s41467-021-23133-9

CaMKII activation persistently segregates postsynaptic proteins via liquid phase separation
Tomohisa Hosokawa, Pin-Wu Liu, Qixu Cai, Joana S. Ferreira, Florian Levet, Corey Butler, Jean-Baptiste Sibarita, Daniel Choquet, Laurent Groc, Eric Hosy, Mingjie Zhang, Yasunori Hayashi
Nat Neurosci. 2021-04-29
10.1038/s41593-021-00843-3

Advanced imaging and labelling methods to decipher brain cell organization and function
Daniel Choquet, Matthieu Sainlos, Jean-Baptiste Sibarita
Nat Rev Neurosci. 2021-03-12
10.1038/s41583-021-00441-z

CaMKII activation triggers persistent formation and segregation of postsynaptic liquid phase
Tomohisa Hosokawa, Pin-Wu Liu, Qixu Cai, Joana S. Ferreira, Florian Levet, Corey Butler, Jean-Baptiste Sibarita, Daniel Choquet, Laurent Groc, Eric Hosy, Mingjie Zhang, Yasunori Hayashi
. 2020-11-26
10.1101/2020.11.25.397091

Distance-dependent regulation of NMDAR nanoscale organization along hippocampal neuron dendrites
Joana S. Ferreira, Julien P. Dupuis, Blanka Kellermayer, Nathan Bénac, Constance Manso, Delphine Bouchet, Florian Levet, Corey Butler, Jean-Baptiste Sibarita, Laurent Groc
Proc Natl Acad Sci USA. 2020-09-14
10.1073/pnas.1922477117

Amoeboid Swimming Is Propelled by Molecular Paddling in Lymphocytes
Laurene Aoun, Alexander Farutin, Nicolas Garcia-Seyda, Paulin Nègre, Mohd Suhail Rizvi, Sham Tlili, Solene Song, Xuan Luo, Martine Biarnes-Pelicot, Rémi Galland, Jean-Baptiste Sibarita, Alphée Michelot, Claire Hivroz, Salima Rafai, Marie-Pierre Valignat, Chaouqi Misbah, Olivier Theodoly
Biophysical Journal. 2020-09-01
10.1016/j.bpj.2020.07.033

Nanoscale co-organization and coactivation of AMPAR, NMDAR, and mGluR at excitatory synapses
Julia Goncalves, Tomas M. Bartol, Côme Camus, Florian Levet, Ana Paula Menegolla, Terrence J. Sejnowski, Jean-Baptiste Sibarita, Michel Vivaudou, Daniel Choquet, Eric Hosy
Proc Natl Acad Sci USA. 2020-06-08
10.1073/pnas.1922563117

SpineJ: A software tool for quantitative analysis of nanoscale spine morphology
Florian Levet, Jan Tønnesen, U. Valentin Nägerl, Jean-Baptiste Sibarita
Methods. 2020-03-01
10.1016/j.ymeth.2020.01.020

A Discrete Presynaptic Vesicle Cycle for Neuromodulator Receptors
Damien Jullié, Miriam Stoeber, Jean-Baptiste Sibarita, Hanna L. Zieger, Thomas M. Bartol, Seksiri Arttamangkul, Terrence J. Sejnowski, Eric Hosy, Mark von Zastrow
Neuron. 2020-02-01
10.1016/j.neuron.2019.11.016

Real-time nanoscale organization of amyloid precursor protein
Shekhar Kedia, Pratyush Ramakrishna, Pallavi Rao Netrakanti, Mini Jose, Jean-Baptiste Sibarita, Suhita Nadkarni, Deepak Nair
Nanoscale. 2020-01-01
10.1039/d0nr00052c

A super-resolution platform for correlative live single-molecule imaging and STED microscopy
V. V. G. Krishna Inavalli, Martin O. Lenz, Corey Butler, Julie Angibaud, Benjamin Compans, Florian Levet, Jan Tønnesen, Olivier Rossier, Gregory Giannone, Olivier Thoumine, Eric Hosy, Daniel Choquet, Jean-Baptiste Sibarita, U. Valentin Nägerl
Nat Methods. 2019-10-21
10.1038/s41592-019-0611-8

SpineJ : A software tool for quantitative analysis of nanoscale spine morphology
Florian Levet, Jan Tønnesen, Valentin Nägerl, Jean-Baptiste Sibarita
. 2019-09-10
10.1101/764548

Transient Activations of Rac1 at the Lamellipodium Tip Trigger Membrane Protrusion.
Amine Mehidi, Olivier Rossier, Matthias Schaks, Anaël Chazeau, Fabien Binamé, Amanda Remorino, Mathieu Coppey, Zeynep Karatas, Jean-Baptiste Sibarita, Klemens Rottner, Violaine Moreau, Grégory Giannone
Current Biology. 2019-09-01
10.1016/j.cub.2019.07.035

Exchange Dynamics of Dynamin Measured in Living Cells During Endocytic Vesicle Formation
Léa Claverie, Morgane Rosendale, Patrice Maschalchi, Corey Butler, Natacha Retailleau, Jean-Baptiste Sibarita, Daniel Choquet, David Perrais
Microsc Microanal. 2019-08-01
10.1017/S1431927619006937

A tessellation-based colocalization analysis approach for single-molecule localization microscopy
Florian Levet, Guillaume Julien, Rémi Galland, Corey Butler, Anne Beghin, Anaël Chazeau, Philipp Hoess, Jonas Ries, Grégory Giannone, Jean-Baptiste Sibarita
Nat Commun. 2019-05-30
10.1038/s41467-019-10007-4

Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software
Daniel Sage, Thanh-An Pham, Hazen Babcock, Tomas Lukes, Thomas Pengo, Jerry Chao, Ramraj Velmurugan, Alex Herbert, Anurag Agrawal, Silvia Colabrese, Ann Wheeler, Anna Archetti, Bernd Rieger, Raimund Ober, Guy M. Hagen, Jean-Baptiste Sibarita, Jonas Ries, Ricardo Henriques, Michael Unser, Seamus Holden
Nat Methods. 2019-04-08
10.1038/s41592-019-0364-4

Author Correction: Single molecule localisation microscopy reveals how HIV-1 Gag proteins sense membrane virus assembly sites in living host CD4 T cells
Charlotte Floderer, Jean-Baptiste Masson, Elise Boilley, Sonia Georgeault, Peggy Merida, Mohamed El Beheiry, Maxime Dahan, Philippe Roingeard, Jean-Baptiste Sibarita, Cyril Favard, Delphine Muriaux
Sci Rep. 2018-11-22
10.1038/s41598-018-35954-8

Single molecule localisation microscopy reveals how HIV-1 Gag proteins sense membrane virus assembly sites in living host CD4 T cells
Charlotte Floderer, Jean-Baptiste Masson, Elise Boilley, Sonia Georgeault, Peggy Merida, Mohamed El Beheiry, Maxime Dahan, Philippe Roingeard, Jean-Baptiste Sibarita, Cyril Favard, Delphine Muriaux
Sci Rep. 2018-11-02
10.1038/s41598-018-34536-y

Bacterial cell wall nanoimaging by autoblinking microscopy
Kevin Floc’h, Françoise Lacroix, Liliana Barbieri, Pascale Servant, Remi Galland, Corey Butler, Jean-Baptiste Sibarita, Dominique Bourgeois, Joanna Timmins
Sci Rep. 2018-09-19
10.1038/s41598-018-32335-z

Bacterial cell wall nanoimaging by autoblanking microscopy
Kevin Floc’h, Françoise Lacroix, Liliana Barbieri, Pascale Servant, Remi Galland, Corey Butler, Jean-Baptiste Sibarita, Dominique Bourgeois, Joanna Timmins
Sci Rep. 2018-09-19
10.1038/s41598-018-32335-z

Phosphatidylserine and GTPase activation control Cdc42 nanoclustering to counter dissipative diffusion
Elodie Sartorel, Caner Ünlü, Mini Jose, Aurélie Massoni-Laporte, Julien Meca, Jean-Baptiste Sibarita, Derek McCusker
MBoC. 2018-06-01
10.1091/mbc.E18-01-0051

Catalytic activation of beta-arrestin by GPCRs
Kelsie Eichel, Damien Jullié, Benjamin Barsi-Rhyne, Naomi R. Latorraca, Matthieu Masureel, Jean-Baptiste Sibarita, Ron O. Dror, Mark von Zastrow
Nature. 2018-05-01
10.1038/s41586-018-0079-1

Live single molecule microscopy of HIV-1 assembly in host T cells reveals a spatio-temporal effect of the viral genome.
Charlotte Floderer, Jean-Baptiste Masson, Elise Boiley, Sonia Georgeault, Peggy Merida, Mohamed El Beheiry, Maxime Dahan, Philippe Roigeard, Jean-Baptiste Sibarita, Cyril Favard, Delphine Muriaux
. 2018-02-19
10.1101/267930

Localization-based super-resolution imaging meets high-content screening
Anne Beghin, Adel Kechkar, Corey Butler, Florian Levet, Marine Cabillic, Olivier Rossier, Gregory Giannone, Rémi Galland, Daniel Choquet, Jean-Baptiste Sibarita
Nat Meth. 2017-10-30
10.1038/nmeth.4486

Nanoscale organization of synaptic adhesion proteins revealed by single-molecule localization microscopy
Ingrid Chamma, Florian Levet, Jean-Baptiste Sibarita, Matthieu Sainlos, Olivier Thoumine
Neurophoton. 2016-11-03
10.1117/1.NPh.3.4.041810

Hunting Down HIV-1 Gag Proteins at the Plasma Membrane of Human T Lymphocytes
Charlotte Mariani-Floderer, Jean-Baptiste Sibarita, Cyril Favard, Delphine M. Muriaux
AIDS Research and Human Retroviruses. 2016-07-01
10.1089/aid.2016.0052

Mapping the dynamics and nanoscale organization of synaptic adhesion proteins using monomeric streptavidin.
Ingrid Chamma, Mathieu Letellier, Corey Butler, Béatrice Tessier, Kok-Hong Lim, Isabel Gauthereau, Daniel Choquet, Jean-Baptiste Sibarita, Sheldon Park, Matthieu Sainlos, Olivier Thoumine
Nat Comms. 2016-03-16
10.1038/ncomms10773

A quantitative imaging-based screen reveals the exocyst as a network hub connecting endocytosis and exocytosis
Mini Jose, Sylvain Tollis, Deepak Nair, Romain Mitteau, Christophe Velours, Aurelie Massoni-Laporte, Anne Royou, Jean-Baptiste Sibarita, Derek McCusker
MBoC. 2015-07-01
10.1091/mbc.E14-11-1527

Two-tiered coupling between flowing actin and immobilized N-cadherin/catenin complexes in neuronal growth cones
Mikael Garcia, Cécile Leduc, Matthieu Lagardère, Amélie Argento, Jean-Baptiste Sibarita, Olivier Thoumine
Proc Natl Acad Sci USA. 2015-05-18
10.1073/pnas.1423455112

Control of autophagosome axonal retrograde flux by presynaptic activity unveiled using botulinum neurotoxin type a
Tong Wang, Sally Martin, Andreas Papadopulos, Callista B. Harper, Timur A. Mavlyutov, Dhevahi Niranjan, Nick R. Glass, Justin J. Cooper-White, Jean-Baptiste Sibarita, Daniel Choquet, Bazbek Davletov, Frédéric A. Meunier
J. Neurosci.. 2015-04-15
10.1523/JNEUROSCI.3757-14.2015

Synaptic recruitment of gephyrin regulates surface GABAA receptor dynamics for the expression of inhibitory LTP
Enrica Maria Petrini, Tiziana Ravasenga, Torben J. Hausrat, Giuliano Iurilli, Umberto Olcese, Victor Racine, Jean-Baptiste Sibarita, Tija C. Jacob, Stephen J. Moss, Fabio Benfenati, Paolo Medini, Matthias Kneussel, Andrea Barberis
Nat Commun. 2014-06-04
10.1038/ncomms4921

Organization and dynamics of AMPA receptors inside synapses—nano-organization of AMPA receptors and main synaptic scaffolding proteins revealed by super-resolution imaging
Eric Hosy, Corey Butler, Jean-Baptiste Sibarita
Current Opinion in Chemical Biology. 2014-06-01
https://www.bordeaux-neurocampus.fr/2173

Synaptic Control of Secretory Trafficking in Dendrites
Cyril Hanus, Lisa Kochen, Susanne tom Dieck, Victor Racine, Jean-Baptiste Sibarita, Erin M. Schuman, Michael D. Ehlers
Cell Reports. 2014-06-01
10.1016/j.celrep.2014.05.028

High-density single-particle tracking: quantifying molecule organization and dynamics at the nanoscale
Jean-Baptiste Sibarita
Histochem Cell Biol. 2014-03-27
10.1007/s00418-014-1214-1

Imaging of molecular surface dynamics in brain slices using single-particle tracking
B. Biermann, S. Sokoll, J. Klueva, M. Missler, J. S. Wiegert, J. -B. Sibarita, M. Heine
Nat Commun. 2014-01-16
10.1038/ncomms4024

C11ORF24 Is a Novel Type I Membrane Protein That Cycles between the Golgi Apparatus and the Plasma Membrane in Rab6-Positive Vesicles
Vincent Fraisier, Amal Kasri, Stéphanie Miserey-Lenkei, Jean-Baptiste Sibarita, Deepak Nair, Adeline Mayeux, Sabine Bardin, Yusuke Toyoda, Ina Poser, Andrei Poznyakovskiy, Bruno Goud, Anthony A. Hyman, Ariane Dimitrov
PLoS ONE. 2013-12-02
10.1371/journal.pone.0082223

Identification and super-resolution imaging of ligand-activated receptor dimers in live cells
Pascale Winckler, Lydia Lartigue, Gregory Giannone, Francesca De Giorgi, François Ichas, Jean-Baptiste Sibarita, Brahim Lounis, Laurent Cognet
Sci Rep. 2013-08-08
10.1038/srep02387

Super-Resolution Imaging Reveals That AMPA Receptors Inside Synapses Are Dynamically Organized in Nanodomains Regulated by PSD95
D. Nair, E. Hosy, J. D. Petersen, A. Constals, G. Giannone, D. Choquet, J.-B. Sibarita
Journal of Neuroscience. 2013-08-07
10.1523/JNEUROSCI.2381-12.2013

Super-Resolution Imaging Reveals That AMPA Receptors Inside Synapses Are Dynamically Organized in Nanodomains Regulated by PSD95
D. Nair, E. Hosy, J. D. Petersen, A. Constals, G. Giannone, D. Choquet, J.-B. Sibarita
Journal of Neuroscience. 2013-08-07
10.1523/JNEUROSCI.2381-12.2013

Super-Resolution Imaging Reveals That AMPA Receptors Inside Synapses Are Dynamically Organized in Nanodomains Regulated by PSD95
D. Nair, E. Hosy, J. D. Petersen, A. Constals, G. Giannone, D. Choquet, J.-B. Sibarita
33. 2013-08-07
10.1523/JNEUROSCI.2381-12.2013

mSYD1A, a Mammalian Synapse-Defective-1 Protein, Regulates Synaptogenic Signaling and Vesicle Docking
Corinna Wentzel, Julia E. Sommer, Ramya Nair, Adeline Stiefvater, Jean-Baptiste Sibarita, Peter Scheiffele
Neuron. 2013-06-01
10.1016/j.neuron.2013.05.010

Real-time analysis and visualization for single-molecule based super-resolution microscopy
Adel Kechkar, Deepak Nair, Mike Heilemann, Daniel Choquet, Jean-Baptiste Sibarita
PLoS ONE. 2013-04-30
10.1371/journal.pone.0062918

Robust polarity establishment occurs via an endocytosis-based cortical corralling mechanism
Mini Jose, Sylvain Tollis, Deepak Nair, Jean-Baptiste Sibarita, Derek McCusker
J Cell Biol. 2013-02-11
10.1083/jcb.201206081

Targeting, resolving and quantifying cellular structures by single-molecule localization microscopy
Jean-Baptiste Sibarita, Mike Heilemann
EMBO Rep. 2012-11-13
10.1038/embor.2012.177

Heterogeneity of AMPA receptor trafficking and molecular interactions revealed by superresolution analysis of live cell imaging
N. Hoze, D. Nair, E. Hosy, C. Sieben, S. Manley, A. Herrmann, J.-B. Sibarita, D. Choquet, D. Holcman
Proceedings of the National Academy of Sciences. 2012-10-03
10.1073/pnas.1204589109

Heterogeneity of AMPA receptor trafficking and molecular interactions revealed by superresolution analysis of live cell imaging
N. Hoze, D. Nair, E. Hosy, C. Sieben, S. Manley, A. Herrmann, J.-B. Sibarita, D. Choquet, D. Holcman
Proceedings of the National Academy of Sciences. 2012-10-03
10.1073/pnas.1204589109

Heterogeneity of AMPA receptor trafficking and molecular interactions revealed by superresolution analysis of live cell imaging
N. Hoze, D. Nair, E. Hosy, C. Sieben, S. Manley, A. Herrmann, J.-B. Sibarita, D. Choquet, D. Holcman
109. 2012-10-03
10.1073/pnas.1204589109

TNF-alpha influences the lateral dynamics of TNF receptor I in living cells
Meike Heidbreder, Christin Zander, Sebastian Malkusch, Darius Widera, Barbara Kaltschmidt, Christian Kaltschmidt, Deepak Nair, Daniel Choquet, Jean-Baptiste Sibarita, Mike Heilemann
Biochimica et Biophysica Acta (BBA) - Molecular Cell Research. 2012-10-01
10.1016/j.bbamcr.2012.06.026

Unified quantitative model of AMPA receptor trafficking at synapses
K. Czondor, M. Mondin, M. Garcia, M. Heine, R. Frischknecht, D. Choquet, J.-B. Sibarita, O. R. Thoumine
Proceedings of the National Academy of Sciences. 2012-02-13
10.1073/pnas.1109818109

Wavelet analysis for single molecule localization microscopy
I. Izeddin, J. Boulanger, V. Racine, C.G. Specht, A. Kechkar, D. Nair, A. Triller, D. Choquet, M. Dahan, J.B. Sibarita
Opt. Express. 2012-01-17
10.1364/OE.20.002081

Ankyrin G restricts ion channel diffusion at the axonal initial segment before the establishment of the diffusion barrier
Brachet A, Leterrier C, Irondelle M, Fache MP, Racine V, Sibarita JB, Choquet D, Dargent B.
J Cell Biol.. 2010 Oct 18
jcb.201003042 [pii]10.1083/jcb.201003042

Inaugural Article: Fast live simultaneous multiwavelength four-dimensional optical microscopy

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1004037107 [pii] 10.1073/pnas.1004037107

Patch-based nonlocal functional for denoising fluorescence microscopy image sequences
J. Boulanger, C. Kervrann, P. Bouthemy, P. Elbau, J.-B. Sibarita, J. Salamero
IEEE Trans. Med. Imaging. 2010-02-01
10.1109/TMI.2009.2033991

AP-1 and KIF13A coordinate endosomal sorting and positioning during melanosome biogenesis

.
jcb.200907122 [pii] 10.1083/jcb.200907122

Activity-dependent tuning of inhibitory neurotransmission based on GABAAR diffusion dynamics

Neuron.. 2009-06-11
10.1016/j.neuron.2009.04.023.

The gene responsible for Dyggve-Melchior-Clausen syndrome encodes a novel peripheral membrane protein dynamically associated with the Golgi apparatus

.
ddn371 [pii] 10.1093/hmg/ddn371

Three-dimensional electron microscopy analysis of ndc10-1 mutant reveals an aberrant organization of the mitotic spindle and spindle pole body defects in Saccharomyces cerevisiae
Romao M, Tanaka K, Sibarita JB, Ly-Hartig NT, Tanaka TU, Antony C.
. 2008 Jul
10.1016/j.jsb.2008.03.015

The interaction of IQGAP1 with the exocyst complex is required for tumor cell invasion downstream of Cdc42 and RhoA
Sakurai-Yageta M, Recchi C, Le Dez G, Sibarita JB, Daviet L, Camonis J, D'Souza-Schorey C, Chavrier P.
J Cell Biol.. 2008 Jun 16
jcb.200709076 [pii]10.1083/jcb.200709076

Surface trafficking of neurotransmitter receptor: comparison between single-molecule/quantum dot strategies
Groc L, Lafourcade M, Heine M, Renner M, Racine V, Sibarita JB, Lounis B, Choquet D, Cognet L.
J Neurosci.. 2007 Nov 14
27/46/12433 [pii]10.1523/JNEUROSCI.3349-07.2007

Myosin va mediates docking of secretory granules at the plasma membrane
Desnos C, Huet S, Fanget I, Chapuis C, Böttiger C, Racine V, Sibarita JB, Henry JP, Darchen F
J Neurosci. 2007-09-26
27/39/10636 [pii]10.1523/JNEUROSCI.1228-07.2007

The human Nup107-160 nuclear pore subcomplex contributes to proper kinetochore functions
Zuccolo M, Alves A, Galy V, Bolhy S, Formstecher E, Racine V, Sibarita JB, Fukagawa T, Shiekhattar R, Yen T, Doye V.
EMBO J.. 2007 Apr 4
7601642 [pii]10.1038/sj.emboj.7601642

The actin-based motor protein myosin II regulates MHC class II trafficking and BCR-driven antigen presentation
Vascotto F, Lankar D, Faure-André G, Vargas P, Diaz J, Le Roux D, Yuseff MI, Sibarita JB, Boes M, Raposo G, Mougneau E, Glaichenhaus N, Bonnerot C, Manoury B, Lennon-Duménil AM.
J Cell Biol.. 2007 Mar 26
jcb.200611147 [pii]10.1083/jcb.200611147

Visualization and quantification of vesicle trafficking on a three-dimensional cytoskeleton network in living cells
Racine V, Sachse M, Salamero J, Fraisier V, Trubuil A, Sibarita JB.
J Microsc.. 2007 Mar
JMI1723 [pii]10.1111/j.1365-2818.2007.01723.x

Pom1 kinase links division plane position to cell polarity by regulating Mid1p cortical distribution
Celton-Morizur S, Racine V, Sibarita JB, Paoletti A.
J Cell Sci.. 2006 Nov 15
jcs.03261 [pii]10.1242/jcs.03261

Anisotropy of cell adhesive microenvironment governs cell internal organization and orientation of polarity
Théry M(1), Racine V, Piel M, Pépin A, Dimitrov A, Chen Y, Sibarita JB, Bornens M.
Proc Natl Acad Sci U S A.. 2006 Dec 26
0609267103 [pii]10.1073/pnas.0609267103

A role for the Rab6A' GTPase in the inactivation of the Mad2-spindle checkpoint
Miserey-Lenkei S, Couëdel-Courteille A, Del Nery E, Bardin S, Piel M, Racine V, Sibarita JB, Perez F, Bornens M, Goud B.
EMBO J.. 2006 Jan 25
7600929 [pii]10.1038/sj.emboj.7600929

The extracellular matrix guides the orientation of the cell division axis
Théry M, Racine V, Pépin A, Piel M, Chen Y, Sibarita JB, Bornens M.
Nat Cell Biol.. 2005-10
ncb1307 [pii]10.1038/ncb1307

The cellular pathway of CD1e in immature and maturing dendritic cells
Angénieux C, Fraisier V, Maître B, Racine V, van der Wel N, Fricker D, Proamer F, Sachse M, Cazenave JP, Peters P, Goud B, Hanau D, Sibarita JB, Salamero J, de la Salle H.
Traffic. 2005 Apr
TRA272 [pii]10.1111/j.1600-0854.2005.00272.x

TI-VAMP/VAMP7 is required for optimal phagocytosis of opsonised particles in macrophages
Braun V, Fraisier V, Raposo G, Hurbain I, Sibarita JB, Chavrier P, Galli T, Niedergang F
EMBO J.. 2004-10
7600427 [pii]10.1038/sj.emboj.7600427

The entire Nup107-160 complex, including three new members, is targeted as one entity to kinetochores in mitosis
Loïodice I, Alves A, Rabut G, Van Overbeek M, Ellenberg J, Sibarita JB, Doye V.
Mol Biol Cell.. 2004-07-15
10.1091/mbc.E03-12-0878E03-12-0878 [pii]

Microtubule release from the centrosome in migrating cells

. 002-12-09
10.1083/jcb.200207076jcb.200207076 [pii]

Relationship between cell migration and cell cycle during the initiation of epithelial to fibroblastoid transition
Bonneton C, Sibarita JB, Thiery JP.
Cell Motil Cytoskeleton.. 1999
10.1002/(SICI)1097-0169(1999)43:43.0.CO;2-Y

Image restoration in X-ray microscopy: PSF determination and biological applications
J. Lehr, J.-B. Sibarita, J.-M. Chassery
IEEE Trans. on Image Process.. 1998-01-01
10.1109/83.661006